2CLP Oxidoreductase date Apr 28, 2006
title Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase M
authors J.E.Debreczeni, B.D.Marsden, C.Johansson, K.Kavanagh, K.Guo, C.Sm O.Gileadi, A.Turnbull, E.Papagrigoriou, F.Von Delft, A.Edwards, C.Arrowsmith, J.Weigelt, M.Sundstrom, U.Oppermann
compound source
Molecule: Aflatoxin B1 Aldehyde Reductase Member 3
Chain: A, B, C, D, E, F, G, H, I, J, K
Synonym: Afb1-Ar 2
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: R3
Expression_system_vector_type: Plasmid
Expression_system_vector: Pnic28-Bsa4
symmetry Space Group: P 32 2 1
R_factor 0.239 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
126.963 126.963 490.497 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
ligand CA, NDP enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G
  • electron transfer activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (541 Kb) [Save to disk]
  • Biological Unit Coordinates (2clp.pdb1.gz) 103 Kb
  • Biological Unit Coordinates (2clp.pdb2.gz) 103 Kb
  • Biological Unit Coordinates (2clp.pdb3.gz) 103 Kb
  • Biological Unit Coordinates (2clp.pdb4.gz) 103 Kb
  • Biological Unit Coordinates (2clp.pdb5.gz) 102 Kb
  • Biological Unit Coordinates (2clp.pdb6.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 2CLP
  • CSU: Contacts of Structural Units for 2CLP
  • Likely Quarternary Molecular Structure file(s) for 2CLP
  • Structure Factors (1325 Kb)
  • Retrieve 2CLP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CLP from S2C, [Save to disk]
  • Re-refined 2clp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2CLP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2CLP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CLP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2clp_A] [2clp_B] [2clp_F] [2clp] [2clp_D] [2clp_K] [2clp_E] [2clp_J] [2clp_I] [2clp_H] [2clp_G] [2clp_C]
  • SWISS-PROT database: [O95154]
  • Domain organization of [ARK73_HUMAN] by SWISSPFAM
    • Other resources with information on 2CLP
  • Community annotation for 2CLP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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