2COB Dna Binding Protein date May 17, 2005
title Solution Structures Of The Hth Domain Of Human Lcor Protein
authors N.Nameki, T.Umehara, M.Sato, S.Koshiba, M.Inoue, A.Tanaka, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Lcor Protein
Chain: A
Fragment: Hth Domain
Synonym: Novel Protein, Likely Ortholog Of Mouse Transcription Factor Mlr2, Mlr2;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mlr2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040816-15
Other_details: Cell-Free Protein Synthesis
methodSolution NMR

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (377 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2COB
  • Retrieve 2COB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2COB from S2C, [Save to disk]
  • View 2COB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2COB
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2COB, from MSDmotif at EBI
  • Fold representative 2cob from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cob] [2cob_A]
  • SWISS-PROT database: [Q96JN0]
  • Domain organization of [LCOR_HUMAN] by SWISSPFAM
  • Other resources with information on 2COB
  • Community annotation for 2COB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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