2CSG Oxidoreductase date May 21, 2005
title Crystal Structure Of The Putative Oxidoreductase From Salmon Typhimurium Lt2
authors Y.Kim, H.Li, F.Collart, A.Joachimiak, Midwest Center For Structu Genomics (Mcsg)
compound source
Molecule: Putative Cytoplasmic Protein
Chain: A
Engineered: Yes
 Organism_scientific: Salmonella Typhimurium
Organism_taxid: 99287
Strain: Lt2
Gene: Ybiu
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21de3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 31 2 1
R_factor 0.188 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
110.801 110.801 105.640 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.90 Å
ligand CIT, FE, ICT, SIN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (2csg.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 2CSG
  • CSU: Contacts of Structural Units for 2CSG
  • Likely Quarternary Molecular Structure file(s) for 2CSG
  • Structure Factors (163 Kb)
  • Retrieve 2CSG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CSG from S2C, [Save to disk]
  • Re-refined 2csg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2CSG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2CSG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CSG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2csg_A] [2csg]
  • SWISS-PROT database: [Q8ZQM7]
  • Domain organization of [Q8ZQM7_SALTY] by SWISSPFAM
    • Other resources with information on 2CSG
  • Community annotation for 2CSG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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