2CU0 Oxidoreductase date May 24, 2005
title Crystal Structure Of Inosine-5'-Monophosphate Dehydrogenase Pyrococcus Horikoshii Ot3
authors Y.Asada, N.Kunishima, Riken Structural Genomicsproteomics Ini (Rsgi)
compound source
Molecule: Inosine-5'-Monophosphate Dehydrogenase
Chain: A, B
Synonym: Imp Dehydrogenase, Impdh, Impd
Ec: 1.1.1.205
Engineered: Yes
Organism_scientific: Pyrococcus Horikoshii
Organism_taxid: 53953
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-Codonplus(De3)-Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 11a
symmetry Space Group: I 4
R_factor 0.205 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
123.666 123.666 130.053 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand XMP enzyme Oxidoreductase E.C.1.1.1.205 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]
  • Biological Unit Coordinates (2cu0.pdb1.gz) 231 Kb
  • Biological Unit Coordinates (2cu0.pdb2.gz) 228 Kb
  • Biological Unit Coordinates (2cu0.pdb3.gz) 455 Kb
  • LPC: Ligand-Protein Contacts for 2CU0
  • CSU: Contacts of Structural Units for 2CU0
  • Likely Quarternary Molecular Structure file(s) for 2CU0
  • Structure Factors (498 Kb)
  • Retrieve 2CU0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CU0 from S2C, [Save to disk]
  • Re-refined 2cu0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CU0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CU0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CU0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cu0_B] [2cu0] [2cu0_A]
  • SWISS-PROT database: [O58045]
  • Domain organization of [IMDH_PYRHO] by SWISSPFAM
  • Domains found in 2CU0: [CBS] [IMPDH ] by SMART
  • Other resources with information on 2CU0
  • Community annotation for 2CU0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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