2CXQ Isomerase date Jun 30, 2005
title Crystal Structure Of Mouse Amf S6p Complex
authors N.Tanaka, A.Haga, N.Naba, K.Shiraiwa, Y.Kusakabe, K.Hashimoto, T.F H.Nagase, A.Raz, K.T.Nakamura
compound source
Molecule: Glucose-6-Phosphate Isomerase
Chain: A, B
Synonym: Cytokine, Gpi, Phosphoglucose Isomerase, Pgi, Phos Isomerase, Phi, Neuroleukin, Nlk;
Ec: 5.3.1.9
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.172 R_Free 0.195
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.871 115.838 73.098 90.00 101.66 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand GOL, S6P enzyme Isomerase E.C.5.3.1.9 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • glucose-6-phosphate isomeras...
  • cytokine activity
  • growth factor activity


  • Primary referenceCrystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors., Tanaka N, Haga A, Naba N, Shiraiwa K, Kusakabe Y, Hashimoto K, Funasaka T, Nagase H, Raz A, Nakamura KT, J Mol Biol. 2006 Feb 17;356(2):312-24. Epub 2005 Dec 9. PMID:16375918
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (203 Kb) [Save to disk]
  • Biological Unit Coordinates (2cxq.pdb1.gz) 198 Kb
  • LPC: Ligand-Protein Contacts for 2CXQ
  • CSU: Contacts of Structural Units for 2CXQ
  • Likely Quarternary Molecular Structure file(s) for 2CXQ
  • Retrieve 2CXQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CXQ from S2C, [Save to disk]
  • View 2CXQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CXQ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2CXQ, from MSDmotif at EBI
  • Fold representative 2cxq from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cxq] [2cxq_A] [2cxq_B]
  • SWISS-PROT database: [P06745]
  • Domain organization of [G6PI_MOUSE] by SWISSPFAM
  • Other resources with information on 2CXQ
  • Community annotation for 2CXQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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