2D1Z date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceCrystallographic snapshots of an entire reaction cycle for a retaining xylanase from Streptomyces olivaceoviridis E-86., Suzuki R, Fujimoto Z, Ito S, Kawahara S, Kaneko S, Taira K, Hasegawa T, Kuno A, J Biochem. 2009 Jul;146(1):61-70. Epub 2009 Mar 11. PMID:19279191
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk]
  • Biological Unit Coordinates (2d1z.pdb1.gz) 75 Kb
  • Biological Unit Coordinates (2d1z.pdb2.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 2D1Z
  • CSU: Contacts of Structural Units for 2D1Z
  • Likely Quarternary Molecular Structure file(s) for 2D1Z
  • Structure Factors (1125 Kb)
  • Retrieve 2D1Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D1Z from S2C, [Save to disk]
  • Re-refined 2d1z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2D1Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d1z] [2d1z_A] [2d1z_B]
  • SWISS-PROT database: [Q7SI98]
  • Domains found in 2D1Z: [Glyco_10] [RICIN ] by SMART

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