2D3F		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	HYP	enzyme
Primary reference	High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering., Okuyama K, Hongo C, Wu G, Mizuno K, Noguchi K, Ebisuzaki S, Tanaka Y, Nishino N, Bachinger HP, Biopolymers. 2009 May;91(5):361-72. PMID:19137577

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk] Biological Unit Coordinates (2d3f.pdb1.gz) 23 Kb Biological Unit Coordinates (2d3f.pdb2.gz) 23 Kb Biological Unit Coordinates (2d3f.pdb3.gz) 45 Kb LPC: Ligand-Protein Contacts for 2D3F CSU: Contacts of Structural Units for 2D3F Likely Quarternary Molecular Structure file(s) for 2D3F Retrieve 2D3F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2D3F from S2C, [Save to disk]

View 2D3F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2d3f] [2d3f_A] [2d3f_B] [2d3f_C] [2d3f_D] [2d3f_E] [2d3f_F] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---