2D5A date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand COA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of CoA recognition by the Pyrococcus single-domain CoA-binding proteins., Hiyama TB, Zhao M, Kitago Y, Yao M, Sekine S, Terada T, Kuroishi C, Liu ZJ, Rose JP, Kuramitsu S, Shirouzu M, Watanabe N, Yokoyama S, Tanaka I, Wang BC, J Struct Funct Genomics. 2006 Dec;7(3-4):119-29. Epub 2007 Mar 7. PMID:17342453
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (2d5a.pdb1.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 2D5A
  • CSU: Contacts of Structural Units for 2D5A
  • Likely Quarternary Molecular Structure file(s) for 2D5A
  • Structure Factors (175 Kb)
  • Retrieve 2D5A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D5A from S2C, [Save to disk]
  • Re-refined 2d5a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2D5A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d5a] [2d5a_A]
  • SWISS-PROT database: [O58836]
  • Domain found in 2D5A: [CoA_binding ] by SMART

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science