2D8L		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GCD, NGA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	A novel glycoside hydrolase family 105: the structure of family 105 unsaturated rhamnogalacturonyl hydrolase complexed with a disaccharide in comparison with family 88 enzyme complexed with the disaccharide., Itoh T, Ochiai A, Mikami B, Hashimoto W, Murata K, J Mol Biol. 2006 Jul 14;360(3):573-85. Epub 2006 May 9. PMID:16781735

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk] Biological Unit Coordinates (2d8l.pdb1.gz) 73 Kb LPC: Ligand-Protein Contacts for 2D8L CSU: Contacts of Structural Units for 2D8L Likely Quarternary Molecular Structure file(s) for 2D8L Structure Factors (457 Kb) Retrieve 2D8L in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2D8L from S2C, [Save to disk] Re-refined 2d8l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2D8L in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2d8l] [2d8l_A] SWISS-PROT database: [O34559]

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