2DAT Transcription date Dec 14, 2005
title Solution Structure Of The Bromodomain Of Human Swisnf Relat Associated Actin Dependent Regulator Of Cromatin Subfamily
authors M.Yoneyama, T.Kigawa, K.Saito, N.Tochio, S.Koshiba, M.Inoue, S.Yok Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Possible Global Transcription Activator Snf2l2
Chain: A
Fragment: Bromodomain
Synonym: Swisnf Related Matrix Associated Actin Dependent Of Chromatin Subfamily A Member 2, Snf2-Alpha;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Smarca2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050302-31
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (658 Kb) [Save to disk]
  • Biological Unit Coordinates (2dat.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 2DAT
  • Retrieve 2DAT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DAT from S2C, [Save to disk]
    • View 2DAT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2DAT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2DAT, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dat_A] [2dat]
  • SWISS-PROT database: [P51531]
  • Domain organization of [SMCA2_HUMAN] by SWISSPFAM
  • Domain found in 2DAT: [BROMO ] by SMART
    • Other resources with information on 2DAT
  • Community annotation for 2DAT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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