2DRE	Crystal structure of Water-soluble chlorophyll protein from lepidium virginicum at 2.00 angstrom resolution	date
authors	Horigome, D., Satoh, H., Itoh, N., Mitsunaga, K., Oonishi, I., Nakagawa, A., Uchida, A.
compound		source
symmetry		R_factor R_Free 0.28
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.00
ligand	CLA	enzyme
Gene Ontology	Chain Function Process Component A, D, C, B endopeptidase inhibitor acti...
Primary reference	Structural mechanism and photoprotective function of water-soluble chlorophyll-binding protein., Horigome D, Satoh H, Itoh N, Mitsunaga K, Oonishi I, Nakagawa A, Uchida A, J Biol Chem. 2006 Dec 14;. PMID:17170107

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (132 Kb) [Save to disk] Biological Unit Coordinates (2dre.pdb1.gz) 126 Kb LPC: Ligand-Protein Contacts for 2DRE CSU: Contacts of Structural Units for 2DRE Structure Factors (408 Kb) Retrieve 2DRE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DRE from S2C, [Save to disk] Re-refined 2dre structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DRE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2DRE

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2DRE, from MSDmotif at EBI Fold representative 2dre from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2dre] [2dre_B] [2dre_D] [2dre_A] [2dre_C] SWISS-PROT database: [O04797] Domain organization of [O04797_LEPVR] by SWISSPFAM Domain found in 2DRE: [STI ] by SMART

Other resources with information on 2DRE

Community annotation for 2DRE at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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