2ED2 Transcription date Feb 14, 2007
title Solution Structure Of Rsgi Ruh-069, A Gtf2i Domain In Human
authors Y.Doi-Katayama, H.Hirota, K.Izumi, F.Hayashi, M.Yoshida, S.Yokoya Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: General Transcription Factor II-I
Chain: A
Fragment: Gtf2i Domain
Synonym: Gtfii-I, Tfii-I, Bruton Tyrosine Kinase-Associated 135, Btk-Associated Protein 135, Bap-135, Srf-Phox1-Interac Protein, Spin, Williams-Beuren Syndrome Chromosome Region 6 Rsgi Ruh-069;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gtf2i
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050627-14
Other_details: Cell-Free Protein Synthesis (E.Coli)
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (518 Kb) [Save to disk]
  • Biological Unit Coordinates (2ed2.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 2ED2
  • Retrieve 2ED2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ED2 from S2C, [Save to disk]
    • View 2ED2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2ED2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ED2, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1f2ed2, region D:1-80 [Jmol] [rasmolscript] [script source]
        - Domain d1d2ed2, region D:349-451 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ed2] [2ed2_A]
  • SWISS-PROT database: [P78347]
  • Domain organization of [GTF2I_HUMAN] by SWISSPFAM
    • Other resources with information on 2ED2
  • Community annotation for 2ED2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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