2EE1 Signaling Protein date Feb 15, 2007
title Solution Structures Of The Chromo Domain Of Human Chromodoma Helicase-Dna-Binding Protein 4
authors M.Sato, N.Tochio, S.Koshiba, S.Watanabe, T.Harada, T.Kigawa, S.Yok Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Chromodomain Helicase-Dna-Binding Protein 4
Chain: A
Fragment: Chromo Domain
Synonym: Atp- Dependent Helicase Chd4, Chd-4, Mi-2 Autoanti Kda Protein, Mi2-Beta;
Ec: 3.6.1.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Chd4
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060904-16
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.1 BRENDA
note 2EE1 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (351 Kb) [Save to disk]
  • Biological Unit Coordinates (2ee1.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 2EE1
  • Original NMR restraints for 2EE1 from PDB
  • Retrieve 2EE1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EE1 from S2C, [Save to disk]
    • View 2EE1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2EE1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EE1, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ee1] [2ee1_A]
  • SWISS-PROT database: [Q14839]
  • Domain organization of [CHD4_HUMAN] by SWISSPFAM
  • Domain found in 2EE1: [CHROMO ] by SMART
    • Other resources with information on 2EE1
  • Community annotation for 2EE1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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