2EGJ Structural Genomics, Unknown Function date Mar 01, 2007
title Crystal Structure Of Hypothetical Protein(Aq1494) From Aquif Aeolicus
authors T.S.Kumarevel, H.Niwa, S.Kuramitsu, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Hypothetical Protein Aq_1494
Chain: A, B
Engineered: Yes
 Organism_scientific: Aquifex Aeolicus
Organism_taxid: 63363
Gene: Aq1494
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Codonplus-Ril-X
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-21a
symmetry Space Group: P 21 21 2
R_factor 0.197 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.468 69.426 84.029 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
note 2EGJ is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (2egj.pdb1.gz) 90 Kb
  • CSU: Contacts of Structural Units for 2EGJ
  • Likely Quarternary Molecular Structure file(s) for 2EGJ
  • Structure Factors (213 Kb)
  • Retrieve 2EGJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EGJ from S2C, [Save to disk]
  • Re-refined 2egj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2EGJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2EGJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EGJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2egj_A] [2egj_B] [2egj]
  • SWISS-PROT database: [O67466]
  • Domain organization of [Y1494_AQUAE] by SWISSPFAM
    • Other resources with information on 2EGJ
  • Community annotation for 2EGJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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