2EU3 Lyase date Oct 28, 2005
title Human Carbonic Anhydrase II In Complex With Novel Inhibitors
authors S.Z.Fisher, L.Govindasamy, N.Boyle, M.Agbandje-Mckenna, D.N.Silv G.M.Blackburn, R.Mckenna
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Fragment: Human Carbonic Anhydrase II
Synonym: Carbonic Anhydrase II, Carbonate Dehydratase II, C Carbonic Anhydrase C;
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca2
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.278 41.396 72.204 90.00 103.96 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand FF3, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray crystallographic studies reveal that the incorporation of spacer groups in carbonic anhydrase inhibitors causes alternate binding modes., Fisher SZ, Govindasamy L, Boyle N, Agbandje-McKenna M, Silverman DN, Blackburn GM, McKenna R, Acta Crystallograph Sect F Struct Biol Cryst Commun. 2006 Jul 1;62(Pt, 7):618-22. Epub 2006 Jun 10. PMID:16820676
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (2eu3.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 2EU3
  • CSU: Contacts of Structural Units for 2EU3
  • Likely Quarternary Molecular Structure file(s) for 2EU3
  • Structure Factors (270 Kb)
  • Retrieve 2EU3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EU3 from S2C, [Save to disk]
  • Re-refined 2eu3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2EU3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2EU3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EU3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2eu3] [2eu3_A]
  • SWISS-PROT database: [P00918]
  • Domain organization of [CAH2_HUMAN] by SWISSPFAM
  • Domain found in 2EU3: [Carb_anhydrase ] by SMART
  • Other resources with information on 2EU3
  • Community annotation for 2EU3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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