2F3N Structural Protein date Nov 22, 2005
title Crystal Structure Of The Native Shank Sam Domain.
authors M.K.Baron, J.U.Bowie, S.Faham
compound source
Molecule: Sh3 And Multiple Ankyrin Repeat Domains 3
Chain: A, B, C
Fragment: Sam Domain
Synonym: Shank3, Proline-Rich Synapse Associated Protein 2, Spank-2;
Engineered: Yes
Mutation: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Gene: Shank3
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet3c
symmetry Space Group: P 65
R_factor 0.206 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
104.715 104.715 40.188 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
Primary referenceAn architectural framework that may lie at the core of the postsynaptic density., Baron MK, Boeckers TM, Vaida B, Faham S, Gingery M, Sawaya MR, Salyer D, Gundelfinger ED, Bowie JU, Science. 2006 Jan 27;311(5760):531-5. PMID:16439662
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (2f3n.pdb1.gz) 13 Kb
  • Biological Unit Coordinates (2f3n.pdb2.gz) 12 Kb
  • Biological Unit Coordinates (2f3n.pdb3.gz) 12 Kb
  • CSU: Contacts of Structural Units for 2F3N
  • Likely Quarternary Molecular Structure file(s) for 2F3N
  • Retrieve 2F3N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2F3N from S2C, [Save to disk]
  • View 2F3N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2F3N
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2F3N, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2f3n_B] [2f3n] [2f3n_C] [2f3n_A]
  • SWISS-PROT database: [Q9JLU4]
  • Domain organization of [SHAN3_RAT] by SWISSPFAM
  • Domain found in 2F3N: [SAM ] by SMART
  • Other resources with information on 2F3N
  • Community annotation for 2F3N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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