OCA Atlas for 2F54

2F54

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
B, G		cellular response to iron io...

Primary reference

Directed evolution of human T cell receptor CDR2 residues by phage display dramatically enhances affinity for cognate peptide-MHC without increasing apparent cross-reactivity., Dunn SM, Rizkallah PJ, Baston E, Mahon T, Cameron B, Moysey R, Gao F, Sami M, Boulter J, Li Y, Jakobsen BK, Protein Sci. 2006 Apr;15(4):710-21. PMID:16600963

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (270 Kb) [Save to disk]

Biological Unit Coordinates (2f54.pdb1.gz) 132 Kb

Biological Unit Coordinates (2f54.pdb2.gz) 134 Kb

CSU: Contacts of Structural Units for 2F54

Likely Quarternary Molecular Structure file(s) for 2F54

Structure Factors (409 Kb)

Retrieve 2F54 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2F54 from S2C, [Save to disk]

Re-refined 2f54 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2F54 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2f54] [2f54_A] [2f54_B] [2f54_C] [2f54_D] [2f54_E] [2f54_F] [2f54_G] [2f54_H] [2f54_K] [2f54_L]

SWISS-PROT database: [P01892] [P61769] [P78358] [P01848] [P01850]

Domains found in 2F54: [IG_like] [IGc1] [IGv ] by SMART

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