2FB5 Membrane Protein date Dec 08, 2005
title Structural Genomics; The Crystal Structure Of The Hypothetic Membrane Spanning Protein From Bacillus Cereus
authors R.Zhang, M.Zhou, S.Ginell, J.Abdullah, F.Collart, A.Joachimiak, Mi Center For Structural Genomics (Mcsg)
compound source
Molecule: Hypothetical Membrane Spanning Protein
Chain: A, B, C
Engineered: Yes
 Organism_scientific: Bacillus Cereus
Organism_taxid: 1396
Atcc: 14579
Gene: Gi:29898520
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdm68
symmetry Space Group: C 1 2 1
R_factor 0.182 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.614 109.609 77.484 90.00 90.07 90.00
method X-Ray Diffractionresolution 1.99 Å
note 2FB5 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk]
  • Biological Unit Coordinates (2fb5.pdb1.gz) 112 Kb
  • Biological Unit Coordinates (2fb5.pdb2.gz) 185 Kb
  • Biological Unit Coordinates (2fb5.pdb3.gz) 223 Kb
  • CSU: Contacts of Structural Units for 2FB5
  • Likely Quarternary Molecular Structure file(s) for 2FB5
  • Structure Factors (466 Kb)
  • Retrieve 2FB5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FB5 from S2C, [Save to disk]
  • Re-refined 2fb5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2FB5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FB5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FB5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fb5_A] [2fb5_B] [2fb5_C] [2fb5]
  • SWISS-PROT database: [Q812L9]
  • Domain organization of [Q812L9_BACCR] by SWISSPFAM
    • Other resources with information on 2FB5
  • Community annotation for 2FB5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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