2FBN Structural Genomics, Unknown Function date Dec 09, 2005
title Plasmodium Falciparum Putative Fk506-Binding Protein Pfl2275c, C-Terminal Tpr-Containing Domain
authors A.Dong, J.Lew, I.Koeieradzki, E.Sundararajan, M.Melone, G.Wasney, Y.Zhao, A.M.Edwards, C.H.Arrowsmith, J.Weigelt, M.Sundstrom, A.Bochkarev, R.Hui, T.Hills, Structural Genomics Consortium (Sgc)
compound source
Molecule: 70 Kda Peptidylprolyl Isomerase, Putative
Chain: A, B
Engineered: Yes
Organism_scientific: Plasmodium Falciparum
Organism_common: Malaria Parasite P. Falciparum
Organism_taxid: 5833
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21 Codon Plus Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P28-Lic-Thrombin Derived From Source 9 Pet28
symmetry Space Group: P 21 21 21
R_factor 0.200 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.239 62.936 103.334 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.63 Å
Primary referenceCrystallographic structure of the tetratricopeptide repeat domain of Plasmodium falciparum FKBP35 and its molecular interaction with Hsp90 C-terminal pentapeptide., Alag R, Bharatham N, Dong A, Hills T, Harikishore A, Widjaja AA, Shochat SG, Hui R, Yoon HS, Protein Sci. 2009 Oct;18(10):2115-24. PMID:19691130
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (2fbn.pdb1.gz) 57 Kb
  • CSU: Contacts of Structural Units for 2FBN
  • Likely Quarternary Molecular Structure file(s) for 2FBN
  • Structure Factors (314 Kb)
  • Retrieve 2FBN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FBN from S2C, [Save to disk]
  • Re-refined 2fbn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FBN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FBN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2FBN, from MSDmotif at EBI
  • Fold representative 2fbn from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fbn_A] [2fbn_B] [2fbn]
  • SWISS-PROT database: [Q8I4V8]
  • Domain organization of [Q8I4V8_PLAF7] by SWISSPFAM
  • Domain found in 2FBN: [TPR ] by SMART
  • Other resources with information on 2FBN
  • Community annotation for 2FBN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science