2FD0 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5BU, CL, K, LIV enzyme
Primary referenceTargeting the dimerization initiation site of HIV-1 RNA with aminoglycosides: from crystal to cell., Ennifar E, Paillart JC, Bodlenner A, Walter P, Weibel JM, Aubertin AM, Pale P, Dumas P, Marquet R, Nucleic Acids Res. 2006 May 5;34(8):2328-39. Print 2006. PMID:16679451
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (2fd0.pdb1.gz) 24 Kb
  • LPC: Ligand-Protein Contacts for 2FD0
  • CSU: Contacts of Structural Units for 2FD0
  • Likely Quarternary Molecular Structure file(s) for 2FD0
  • Structure Factors (183 Kb)
  • Retrieve 2FD0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FD0 from S2C, [Save to disk]
  • Re-refined 2fd0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FD0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fd0] [2fd0_A] [2fd0_B]
  • SWISS-PROT database:

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