2FHG Hydrolase date Dec 23, 2005
title Crystal Structure Of Mycobacterial Tuberculosis Proteasome
authors G.Hu, G.Lin, M.Wang, L.Dick, R.M.Xu, C.Nathan, H.Li
compound source
Molecule: 20s Proteasome, Alpha And Beta Subunits
Chain: A, B, D, F, I, K, M, O, Q, S, U, W, Y, 1
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Prca
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prca-Prcb-His6

Molecule: Proteasome, Beta Subunit
Chain: H, C, E, G, J, L, N, P, R, T, V, X, Z, 2
Engineered: Yes

Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Prcb
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pacycduet
symmetry Space Group: P 1 21 1
R_factor 0.243 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
173.327 113.802 200.133 90.00 113.93 90.00
method X-Ray Diffractionresolution 3.23 Å
Gene
Ontology
ChainFunctionProcessComponent
S, F, K, Y, Q, 1, M, A, O, W, B, D, I, U


T, N, E, 2, V, Z, C, L, J, X, P, H, R, G


Primary referenceStructure of the Mycobacterium tuberculosis proteasome and mechanism of inhibition by a peptidyl boronate., Hu G, Lin G, Wang M, Dick L, Xu RM, Nathan C, Li H, Mol Microbiol. 2006 Mar;59(5):1417-28. PMID:16468986
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (795 Kb) [Save to disk]
  • Biological Unit Coordinates (2fhg.pdb1.gz) 783 Kb
  • CSU: Contacts of Structural Units for 2FHG
  • Likely Quarternary Molecular Structure file(s) for 2FHG
  • Structure Factors (1379 Kb)
  • Retrieve 2FHG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FHG from S2C, [Save to disk]
  • Re-refined 2fhg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FHG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FHG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FHG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fhg_W] [2fhg] [2fhg_F] [2fhg_A] [2fhg_H] [2fhg_O] [2fhg_K] [2fhg_2] [2fhg_Y] [2fhg_C] [2fhg_1] [2fhg_L] [2fhg_M] [2fhg_U] [2fhg_R] [2fhg_P] [2fhg_I] [2fhg_B] [2fhg_N] [2fhg_S] [2fhg_E] [2fhg_Q] [2fhg_Z] [2fhg_X] [2fhg_V] [2fhg_J] [2fhg_D] [2fhg_G] [2fhg_T]
  • SWISS-PROT database: [O33244] [O33245]
  • Domain organization of [PSA_MYCTU] [PSB_MYCTU] by SWISSPFAM
  • Other resources with information on 2FHG
  • Community annotation for 2FHG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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