2FHH Hydrolase date Dec 23, 2005
title Crystal Structure Of Mycobacterium Tuberculosis Proteasome I With A Peptidyl Boronate Inhibitor Mln-273
authors H.Li
compound source
Molecule: 20s Proteasome, Alpha And Beta Subunits
Chain: A, B, D, F, I, K, M, O, Q, S, U, W, Y, 1
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Prca
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prca-Prcb-His6

Molecule: Proteasome, Beta Subunit
Chain: H, C, E, G, J, L, N, P, R, T, V, X, Z, 2
Engineered: Yes

Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Prcb
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pacycduet
symmetry Space Group: P 1 21 1
R_factor 0.226 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
173.957 116.172 200.203 90.00 112.71 90.00
method X-Ray Diffractionresolution 2.99 Å
ligand M1N enzyme
Gene
Ontology
ChainFunctionProcessComponent
S, F, K, Y, Q, 1, M, A, O, W, B, D, I, U


T, N, E, 2, V, Z, C, L, J, X, P, H, R, G


Primary referenceStructure of the Mycobacterium tuberculosis proteasome and mechanism of inhibition by a peptidyl boronate., Hu G, Lin G, Wang M, Dick L, Xu RM, Nathan C, Li H, Mol Microbiol. 2006 Mar;59(5):1417-28. PMID:16468986
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (911 Kb) [Save to disk]
  • Biological Unit Coordinates (2fhh.pdb1.gz) 895 Kb
  • LPC: Ligand-Protein Contacts for 2FHH
  • CSU: Contacts of Structural Units for 2FHH
  • Likely Quarternary Molecular Structure file(s) for 2FHH
  • Structure Factors (2040 Kb)
  • Retrieve 2FHH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FHH from S2C, [Save to disk]
  • Re-refined 2fhh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FHH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FHH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FHH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fhh_R] [2fhh_D] [2fhh] [2fhh_O] [2fhh_C] [2fhh_W] [2fhh_S] [2fhh_K] [2fhh_M] [2fhh_T] [2fhh_X] [2fhh_Q] [2fhh_Z] [2fhh_P] [2fhh_L] [2fhh_N] [2fhh_V] [2fhh_Y] [2fhh_G] [2fhh_B] [2fhh_H] [2fhh_F] [2fhh_I] [2fhh_A] [2fhh_2] [2fhh_J] [2fhh_1] [2fhh_U] [2fhh_E]
  • SWISS-PROT database: [O33244] [O33245]
  • Domain organization of [PSA_MYCTU] [PSB_MYCTU] by SWISSPFAM
  • Other resources with information on 2FHH
  • Community annotation for 2FHH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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