2FHZ Immune System, Hydrolase date Dec 27, 2005
title Molecular Basis Of Inhibition Of The Ribonuclease Activity In Colicin E5 By Its Cognate Immunity Protein
authors Y.L.Lin, R.H.Huang
compound source
Molecule: Colicin-E5 Immunity Protein
Chain: A
Synonym: Imme5, Microcin-E5 Immunity Protein
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Imm
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Plm1-Cole5-Imm5 From Plm1

Molecule: Colicin-E5
Chain: B
Fragment: Residues 74-180
Ec: 3.1.-.-
Engineered: Yes

Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Col
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Plm1
symmetry Space Group: I 2 2 2
R_factor 0.195 R_Free 0.200
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.790 73.640 110.110 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.15 Å
ligand
enzyme Hydrolase E.C.3.1 BRENDA
note 2FHZ is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceMolecular Basis of Inhibition of the Ribonuclease Activity in Colicin E5 by Its Cognate Immunity Protein., Luna-Chavez C, Lin YL, Huang RH, J Mol Biol. 2006 Feb 24;. PMID:16524591
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (2fhz.pdb1.gz) 37 Kb
  • CSU: Contacts of Structural Units for 2FHZ
  • Likely Quarternary Molecular Structure file(s) for 2FHZ
  • Structure Factors (718 Kb)
  • Retrieve 2FHZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FHZ from S2C, [Save to disk]
  • Re-refined 2fhz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FHZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FHZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FHZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fhz_B] [2fhz] [2fhz_A]
  • SWISS-PROT database: [P18000] [P13476]
  • Domain organization of [CEA5_ECOLX] [IMM5_ECOLX] by SWISSPFAM
  • Other resources with information on 2FHZ
  • Community annotation for 2FHZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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