OCA Atlas for 2FX8

2FX8

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

AIB

enzyme

Primary reference

Structural basis of enhanced binding of extended and helically constrained peptide epitopes of the broadly neutralizing HIV-1 antibody 4E10., Cardoso RM, Brunel FM, Ferguson S, Zwick M, Burton DR, Dawson PE, Wilson IA, J Mol Biol. 2007 Feb 2;365(5):1533-44. Epub 2006 Nov 10. PMID:17125793

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (290 Kb) [Save to disk]

Biological Unit Coordinates (2fx8.pdb1.gz) 76 Kb

Biological Unit Coordinates (2fx8.pdb2.gz) 75 Kb

Biological Unit Coordinates (2fx8.pdb3.gz) 76 Kb

Biological Unit Coordinates (2fx8.pdb4.gz) 76 Kb

LPC: Ligand-Protein Contacts for 2FX8

CSU: Contacts of Structural Units for 2FX8

Likely Quarternary Molecular Structure file(s) for 2FX8

Structure Factors (712 Kb)

Retrieve 2FX8 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2FX8 from S2C, [Save to disk]

Re-refined 2fx8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2FX8 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2fx8] [2fx8_H] [2fx8_I] [2fx8_J] [2fx8_K] [2fx8_L] [2fx8_M] [2fx8_N] [2fx8_O] [2fx8_P] [2fx8_Q] [2fx8_R] [2fx8_S]

SWISS-PROT database: [P05880]

Domains found in 2FX8: [IG_like] [IGv ] by SMART

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