2FXY Hydrolase date Feb 07, 2006
title Solution Structure Of 55-72 Segment Of Staphylococcal Nuclea
authors M.Wang, L.Shan, J.F.Wang
compound source
Molecule: 18-Mer Peptide From Thermonuclease
Chain: A
Synonym: Snase
Ec: 3.1.31.1
Engineered: Yes
 Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized. The Of The Peptide Is Naturally Found In Staphylococcus Aureus.
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.1.31.1 BRENDA
Primary referenceTwo peptide fragments G55-I72 and K97-A109 from staphylococcal nuclease exhibit different behaviors in conformational preferences for helix formation., Wang M, Shan L, Wang J, Biopolymers. 2006 Oct 15;83(3):268-79. PMID:16767771
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (2fxy.pdb1.gz) 5 Kb
  • CSU: Contacts of Structural Units for 2FXY
  • Original NMR restraints for 2FXY from PDB
  • Retrieve 2FXY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FXY from S2C, [Save to disk]
    • View 2FXY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FXY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FXY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fxy] [2fxy_A]
  • SWISS-PROT database: [P00644]
  • Domain organization of [NUC_STAAU] by SWISSPFAM
    • Other resources with information on 2FXY
  • Community annotation for 2FXY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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