2FYS	Transferase	date	Feb 08, 2006
title	Crystal Structure Of Erk2 Complex With Kim Peptide Derived F
authors	S.Liu, J.P.Sun, B.Zhou, Z.Y.Zhang
compound		source
Molecule: Mitogen-Activated Protein Kinase 1 Chain: B, A Synonym: Extracellular Signal-Regulated Kinase 2, Erk-2, Mi Activated Protein Kinase 2, Map Kinase 2, Mapk 2, P42-Mapk, Ec: 2.7.1.37 Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Gene: Mapk1, Erk2, Mapk, Prkm1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Npt7-His6
Molecule: Dual Specificity Protein Phosphatase 6 Chain: D, C Fragment: Kim Peptide, Residues 60-76 (Sws Q64346) Synonym: Mitogen-Activated Protein Kinase Phosphatase 3, Ma Phosphatase 3, Mkp-3; Ec: 3.1.3.48, 3.1.3.16 Engineered: Yes		Synthetic: Yes Other_details: Chemically Synthesized.
symmetry	Space Group: P 1 21 1	R_factor 0.174 R_Free 0.266
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.377 67.478 86.605 90.00 99.55 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand		enzyme	Transferase E.C.2.7.1.37 BRENDA
Gene Ontology	Chain Function Process Component A, B MAP kinase activity MAP kinase kinase activity
Primary reference	Structural basis of docking interactions between ERK2 and MAP kinase phosphatase 3., Liu S, Sun JP, Zhou B, Zhang ZY, Proc Natl Acad Sci U S A. 2006 Apr 4;103(14):5326-31. Epub 2006 Mar 27. PMID:16567630

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk] Biological Unit Coordinates (2fys.pdb1.gz) 62 Kb Biological Unit Coordinates (2fys.pdb2.gz) 64 Kb CSU: Contacts of Structural Units for 2FYS Likely Quarternary Molecular Structure file(s) for 2FYS Structure Factors (237 Kb) Retrieve 2FYS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2FYS from S2C, [Save to disk] Re-refined 2fys structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2FYS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2FYS

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2FYS, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2fys_D] [2fys] [2fys_B] [2fys_C] [2fys_A] SWISS-PROT database: [Q64346] [P63086] Domain organization of [DUS6_RAT] [MK01_RAT] by SWISSPFAM Domain found in 2FYS: [S_TKc ] by SMART

Other resources with information on 2FYS

Community annotation for 2FYS at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---