2FYU Crystal structure of bovine heart mitochondrial bc1 with jg144 inhibitor date
authors Xia, D., Esser, L.
compound source
symmetry
R_factor
R_Free 0.28328
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.26
ligand FDN, FES, HEM enzyme
note 2FYU is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


D


E


F


G


H


I


J


K
  • ubiquinol-cytochrome-c reduc...


  • Primary referenceSurface-modulated motion switch: Capture and release of iron-sulfur protein in the cytochrome bc1 complex., Esser L, Gong X, Yang S, Yu L, Yu CA, Xia D, Proc Natl Acad Sci U S A. 2006 Aug 21;. PMID:16924113
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (355 Kb) [Save to disk]
  • Biological Unit Coordinates (2fyu.pdb1.gz) 674 Kb
  • LPC: Ligand-Protein Contacts for 2FYU
  • CSU: Contacts of Structural Units for 2FYU
  • Likely Quarternary Molecular Structure file(s) for 2FYU
  • Retrieve 2FYU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FYU from S2C, [Save to disk]
  • View 2FYU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FYU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FYU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fyu_G] [2fyu_A] [2fyu_K] [2fyu_E] [2fyu_F] [2fyu] [2fyu_B] [2fyu_D] [2fyu_J] [2fyu_H] [2fyu_I] [2fyu_C]
  • SWISS-PROT database: [P00125] [P00157] [P07552] [P31800] [P23004] [P00126] [P00129] [P13271] [P00130] [P13272]
  • Belongs to the proton-translocating quinol:cytochrome c reductase (qcr) superfamily according to TCDB.
  • Domain organization of [CY1_BOVIN] [CYB_BOVIN] [QCR10_BOVIN] [QCR1_BOVIN] [QCR2_BOVIN] [QCR6_BOVIN] [QCR7_BOVIN] [QCR8_BOVIN] [QCR9_BOVIN] [UCRI_BOVIN] by SWISSPFAM
  • Other resources with information on 2FYU
  • Community annotation for 2FYU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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