2G15 Transferase date Feb 13, 2006
title Structural Characterization Of Autoinhibited C-Met Kinase
authors W.Wang, A.Marimuthu, J.Tsai, A.Kumar, H.I.Krupka, C.Zhang, B.Powel Y.Suzuki, H.Nguyen, M.Tabrizizad, C.Luu, B.L.West
compound source
Molecule: Activated Met Oncogene
Chain: A
Fragment: Tyrosine Kinase, Catalytic Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Pet-N6 Bi-Ptp
symmetry Space Group: P 21 3
R_factor 0.223 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
103.803 103.803 103.803 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.15 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural characterization of autoinhibited c-Met kinase produced by coexpression in bacteria with phosphatase., Wang W, Marimuthu A, Tsai J, Kumar A, Krupka HI, Zhang C, Powell B, Suzuki Y, Nguyen H, Tabrizizad M, Luu C, West BL, Proc Natl Acad Sci U S A. 2006 Mar 7;103(10):3563-8. Epub 2006 Feb 28. PMID:16537444
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (2g15.pdb1.gz) 51 Kb
  • CSU: Contacts of Structural Units for 2G15
  • Likely Quarternary Molecular Structure file(s) for 2G15
  • Structure Factors (810 Kb)
  • Retrieve 2G15 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2G15 from S2C, [Save to disk]
  • Re-refined 2g15 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2G15 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2G15
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2G15, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2g15_A] [2g15]
  • SWISS-PROT database: [P08581]
  • Domain organization of [MET_HUMAN] by SWISSPFAM
  • Domain found in 2G15: [TyrKc ] by SMART
  • Other resources with information on 2G15
  • Community annotation for 2G15 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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