2GA6	Viral Protein	date	Mar 08, 2006
title	The Crystal Structure Of Sars Nsp10 Without Zinc Ion As Addi
authors	D.Su, Z.Lou, F.Sun, Y.Zhai, H.Yang, Z.Rao
compound		source
Molecule: Orf1a Polyprotein Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R V, W, X; Fragment: Nsp10 Protein Engineered: Yes		Organism_scientific: Sars Coronavirus Organism_taxid: 227859 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-6p-1
symmetry	Space Group: C 2 2 21	R_factor 0.219 R_Free 0.267
crystal cell	length a length b length c angle alpha angle beta angle gamma 159.737 322.703 162.153 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	ZN	enzyme
Gene Ontology	Chain Function Process Component S, F, T, N, K, E, V, Q, M, C, L, A, J, O, W, X, P, B, H, D, R, I, G, U
Primary reference	Dodecamer structure of severe acute respiratory syndrome coronavirus nonstructural protein nsp10., Su D, Lou Z, Sun F, Zhai Y, Yang H, Zhang R, Joachimiak A, Zhang XC, Bartlam M, Rao Z, J Virol. 2006 Aug;80(16):7902-8. PMID:16873247

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (447 Kb) [Save to disk] Biological Unit Coordinates (2ga6.pdb1.gz) 220 Kb Biological Unit Coordinates (2ga6.pdb2.gz) 222 Kb LPC: Ligand-Protein Contacts for 2GA6 CSU: Contacts of Structural Units for 2GA6 Likely Quarternary Molecular Structure file(s) for 2GA6 Structure Factors (2391 Kb) Retrieve 2GA6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GA6 from S2C, [Save to disk] Re-refined 2ga6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GA6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GA6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GA6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ga6_H] [2ga6_C] [2ga6_W] [2ga6_K] [2ga6_Q] [2ga6_L] [2ga6_N] [2ga6_M] [2ga6_V] [2ga6_O] [2ga6_X] [2ga6_T] [2ga6_B] [2ga6_E] [2ga6_D] [2ga6_J] [2ga6_F] [2ga6_G] [2ga6_S] [2ga6] [2ga6_I] [2ga6_A] [2ga6_R] [2ga6_P] [2ga6_U] SWISS-PROT database: [P0C6X7] [P0C6U8] Domain organization of [R1AB_CVHSA] [R1A_CVHSA] by SWISSPFAM

Other resources with information on 2GA6

Community annotation for 2GA6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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