2GAU Transcription date Mar 09, 2006
title Crystal Structure Of Transcriptional Regulator, Crpfnr Fami Porphyromonas Gingivalis (Apc80792), Structural Genomics, M
authors F.J.Rotella, R.G.Zhang, R.Mulligan, S.Moy, A.Joachimiak, Midwest For Structural Genomics (Mcsg)
compound source
Molecule: Transcriptional Regulator, Crpfnr Family
Chain: A
Engineered: Yes
Organism_scientific: Porphyromonas Gingivalis
Organism_taxid: 242619
Strain: W83
Gene: Pg0396
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 41 21 2
R_factor 0.208 R_Free 0.258
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.723 76.723 86.320 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (2gau.pdb1.gz) 76 Kb
  • CSU: Contacts of Structural Units for 2GAU
  • Likely Quarternary Molecular Structure file(s) for 2GAU
  • Structure Factors (305 Kb)
  • Retrieve 2GAU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GAU from S2C, [Save to disk]
  • Re-refined 2gau structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GAU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GAU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GAU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gau_A] [2gau]
  • SWISS-PROT database: [Q7MAW7]
  • Domain organization of [Q7MAW7_PORGI] by SWISSPFAM
  • Domains found in 2GAU: [HTH_CRP] [cNMP ] by SMART
  • Other resources with information on 2GAU
  • Community annotation for 2GAU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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