2GC1 The crystal structure of phosphoglucose isomerase from Pyrococcus furiosus in complex with sorbitol 6-phosphate and zinc date
authors Berrisford, J.M., Rice, D.W., Baker, P.J.
compound source
symmetry
R_factor
R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.95
ligand S6P, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceEvidence Supporting a cis-enediol-based Mechanism for Pyrococcus furiosus Phosphoglucose Isomerase., Berrisford JM, Hounslow AM, Akerboom J, Hagen WR, Brouns SJ, van der Oost J, Murray IA, Michael Blackburn G, Waltho JP, Rice DW, Baker PJ, J Mol Biol. 2006 Mar 24;. PMID:16580686
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (2gc1.pdb1.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 2GC1
  • CSU: Contacts of Structural Units for 2GC1
  • Likely Quarternary Molecular Structure file(s) for 2GC1
  • Structure Factors (217 Kb)
  • Retrieve 2GC1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GC1 from S2C, [Save to disk]
  • Re-refined 2gc1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GC1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GC1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GC1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1j2gc1, region C:7-158 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gc1] [2gc1_B] [2gc1_A]
  • SWISS-PROT database: [P83194]
  • Domain organization of [G6PI_PYRFU] by SWISSPFAM
  • Other resources with information on 2GC1
  • Community annotation for 2GC1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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