2GMS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, P0P enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe structure of GDP-4-keto-6-deoxy-D-mannose-3-dehydratase: a unique coenzyme B6-dependent enzyme., Cook PD, Thoden JB, Holden HM, Protein Sci. 2006 Sep;15(9):2093-106. PMID:16943443
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk]
  • Biological Unit Coordinates (2gms.pdb1.gz) 125 Kb
  • LPC: Ligand-Protein Contacts for 2GMS
  • CSU: Contacts of Structural Units for 2GMS
  • Likely Quarternary Molecular Structure file(s) for 2GMS
  • Structure Factors (726 Kb)
  • Retrieve 2GMS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GMS from S2C, [Save to disk]
  • Re-refined 2gms structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GMS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gms] [2gms_A] [2gms_B]
  • SWISS-PROT database: [Q9F118]

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