2GNI	Transferase Transferase Inhibitor	date	Apr 10, 2006
title	Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor Fasud (Ha1077)
authors	S.Bonn, S.Herrero, C.B.Breitenlechner, R.A.Engh, M.Gassel, D.Boss
compound		source
Molecule: Camp-Dependent Protein Kinase, Alpha-Catalytic Su Chain: A Synonym: Pka C-Alpha Ec: 2.7.11.11 Engineered: Yes Mutation: Yes		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913 Gene: Prkaca Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21de3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pt7-7
Molecule: Camp-Dependent Protein Kinase Inhibitor Alpha Chain: I Fragment: Pki(Residues 5-24) Synonym: Pki-Alpha, Camp-Dependent Protein Kinase Inhibitor Musclebrain Isoform; Engineered: Yes		Synthetic: Yes Other_details: The Peptide Was Chemically Synthesized. The Of The Peptide Is Naturally Found In Rabbit.
symmetry	Space Group: P 21 21 21	R_factor 0.188 R_Free 0.268
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.227 75.959 80.396 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.27 Å
ligand	M77, SEP, TPO BindingDB	enzyme	Transferase E.C.2.7.11.11 BRENDA
Gene Ontology	Chain Function Process Component A I
Primary reference	Structural analysis of protein kinase A mutants with Rho-kinase inhibitor specificity., Bonn S, Herrero S, Breitenlechner CB, Erlbruch A, Lehmann W, Engh RA, Gassel M, Bossemeyer D, J Biol Chem. 2006 Aug 25;281(34):24818-30. Epub 2006 May 12. PMID:16699172

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk] Biological Unit Coordinates (2gni.pdb1.gz) 64 Kb LPC: Ligand-Protein Contacts for 2GNI CSU: Contacts of Structural Units for 2GNI Likely Quarternary Molecular Structure file(s) for 2GNI Structure Factors (370 Kb) Retrieve 2GNI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GNI from S2C, [Save to disk] Re-refined 2gni structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GNI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GNI

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GNI, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2gni_I] [2gni_A] [2gni] SWISS-PROT database: [P61925] [P00517] Domain organization of [IPKA_HUMAN] [KAPCA_BOVIN] by SWISSPFAM Domains found in 2GNI: [S_TK_X] [S_TKc ] by SMART

Other resources with information on 2GNI

Community annotation for 2GNI at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---