2GOX	Cell Adhesion Toxin	date	Apr 14, 2006
title	Crystal Structure Of Efb-C C3d Complex
authors	M.Hammel, B.V.Geisbrecht
compound		source
Molecule: Complement C3 Chain: A, C FRAGMENT: FRAGMENT OF ALPHA Chain: RESIDUES 996-1287 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: C3 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pt7-
Molecule: Fibrinogen-Binding Protein Chain: B, D Fragment: C-Terminal Domain: Residues 101-165 Engineered: Yes		Organism_scientific: Staphylococcus Aureus Subsp. Aureus Mu Organism_taxid: 158878 Strain: Mu50 Atcc 700699 Gene: Efb Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pt7hmt
symmetry	Space Group: P 41	R_factor 0.181 R_Free 0.231
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.939 90.939 122.242 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
Gene Ontology	Chain Function Process Component A, C D, B
Primary reference	A structural basis for complement inhibition by Staphylococcus aureus., Hammel M, Sfyroera G, Ricklin D, Magotti P, Lambris JD, Geisbrecht BV, Nat Immunol. 2007 Apr;8(4):430-437. Epub 2007 Mar 11. PMID:17351618

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk] Biological Unit Coordinates (2gox.pdb1.gz) 60 Kb Biological Unit Coordinates (2gox.pdb2.gz) 60 Kb CSU: Contacts of Structural Units for 2GOX Likely Quarternary Molecular Structure file(s) for 2GOX Structure Factors (752 Kb) Retrieve 2GOX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GOX from S2C, [Save to disk] Re-refined 2gox structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GOX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GOX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GOX, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2gox_B] [2gox_C] [2gox_D] [2gox] [2gox_A] SWISS-PROT database: [P01024] [P68799] Domain organization of [CO3_HUMAN] [FIB_STAAM] by SWISSPFAM Domain found in 2GOX: [Thiol-ester_cl ] by SMART

Other resources with information on 2GOX

Community annotation for 2GOX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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