2GSV X-Ray Crystal Structure of Protein YvfG from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR478. date
authors Forouhar, F., Su, M., Jayaraman, S., Wang, D., Fang, Y., Cunningham, K., Conover, K., Ma, L.C., Xiao, R., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., NESG, Northeast.Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand MSE, SO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (2gsv.pdb1.gz) 25 Kb
  • Biological Unit Coordinates (2gsv.pdb2.gz) 49 Kb
  • Biological Unit Coordinates (2gsv.pdb3.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 2GSV
  • CSU: Contacts of Structural Units for 2GSV
  • Likely Quarternary Molecular Structure file(s) for 2GSV
  • Structure Factors (382 Kb)
  • Retrieve 2GSV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GSV from S2C, [Save to disk]
  • Re-refined 2gsv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2GSV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2GSV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GSV, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gsv_B] [2gsv_A] [2gsv]
  • SWISS-PROT database: [P71066]
  • Domain organization of [YVFG_BACSU] by SWISSPFAM
    • Other resources with information on 2GSV
  • Community annotation for 2GSV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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