2GX9	Transcription, Virus Viral Protein	date	May 08, 2006
title	X-Ray Structure Of Influenza Virus Ns1 Effector Domain
authors	Z.A.Bornholdt, B.V.Prasad
compound		source
Molecule: Ns1 Effector Domain Chain: A, B Fragment: Ns1 Effector Domain Synonym: Nonstructural Protein Ns1 Engineered: Yes		Organism_scientific: Unidentified Influenza Virus Organism_taxid: 11309 Strain: Apuerto Rico834 Gene: Segment 8 - Ns1 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 43 2 2	R_factor 0.206 R_Free 0.223
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.000 59.000 268.022 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	MSE, SCN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	X-ray structure of influenza virus NS1 effector domain., Bornholdt ZA, Prasad BV, Nat Struct Mol Biol. 2006 May 21;. PMID:16715094

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (2gx9.pdb1.gz) 44 Kb LPC: Ligand-Protein Contacts for 2GX9 CSU: Contacts of Structural Units for 2GX9 Likely Quarternary Molecular Structure file(s) for 2GX9 Structure Factors (336 Kb) Retrieve 2GX9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GX9 from S2C, [Save to disk] Re-refined 2gx9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GX9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GX9

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GX9, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2gx9_A] [2gx9_B] [2gx9] SWISS-PROT database: [P03496] Domain organization of [NS1_I34A1] by SWISSPFAM

Other resources with information on 2GX9

Community annotation for 2GX9 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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