2HF3 Contractile Protein date Jun 22, 2006
title Crystal Structure Of Monomeric Actin In The Adp Bound State
authors M.A.Rould, Q.Wan, P.B.Joel, S.Lowey, K.M.Trybus
compound source
Molecule: Actin-5c
Chain: A
Engineered: Yes
Mutation: Yes
Organism_scientific: Drosophila Melanogaster
Organism_common: Fruit Fly
Organism_taxid: 7227
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: C 1 2 1
R_factor 0.175 R_Free 0.213
crystal
cell
length a length b length c angle alpha angle beta angle gamma
199.700 54.070 39.590 90.00 93.16 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ADP, CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A

  • Ino80 complex
  • Primary referenceCrystal structures of expressed non-polymerizable monomeric actin in the ADP and ATP states., Rould MA, Wan Q, Joel PB, Lowey S, Trybus KM, J Biol Chem. 2006 Oct 20;281(42):31909-19. Epub 2006 Aug 18. PMID:16920713
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (2hf3.pdb1.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 2HF3
  • CSU: Contacts of Structural Units for 2HF3
  • Likely Quarternary Molecular Structure file(s) for 2HF3
  • Structure Factors (321 Kb)
  • Retrieve 2HF3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HF3 from S2C, [Save to disk]
  • Re-refined 2hf3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HF3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HF3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HF3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hf3] [2hf3_A]
  • SWISS-PROT database: [P10987]
  • Domain organization of [ACT1_DROME] by SWISSPFAM
  • Domain found in 2HF3: [ACTIN ] by SMART
  • Other resources with information on 2HF3
  • Community annotation for 2HF3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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