2HHE Oxygen Transport date Sep 29, 1994
title Oxygen Affinity Modulation By The N-Termini Of The Beta Chai Human And Bovine Hemoglobin
authors G.L.Gilliland, I.Pechik, C.Fronticelli, X.Ji
compound source
Molecule: Hemoglobin (Deoxy) (Alpha Chain)
Chain: A, C
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Beta-Globin Cdna Fused To A Truncated Viral Gene
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pjk05 (Fronticelli Et Al. 1991)

Molecule: Hemoglobin (Deoxy) (Beta Chain)
Chain: B, D
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Beta-Globin Cdna Fused To A Truncated Viral Gene
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pjk05 (Fronticelli Et Al. 1991)
symmetry Space Group: P 1 21 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.710 82.380 53.580 90.00 99.21 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand HEM enzyme
related structures by homologous chain: 1Y5K, 2HBD
Gene
Ontology
ChainFunctionProcessComponent
A, C
  • peroxidase activity


  • D, B
  • peroxidase activity


  • Primary referenceChloride ion independence of the Bohr effect in a mutant human hemoglobin beta (V1M+H2deleted)., Fronticelli C, Pechik I, Brinigar WS, Kowalczyk J, Gilliland GL, J Biol Chem. 1994 Sep 30;269(39):23965-9. PMID:7929044
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (2hhe.pdb1.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 2HHE
  • CSU: Contacts of Structural Units for 2HHE
  • Likely Quarternary Molecular Structure file(s) for 2HHE
  • Retrieve 2HHE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HHE from S2C, [Save to disk]
  • View 2HHE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HHE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HHE, from MSDmotif at EBI
  • Genome occurence of 2HHE's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2hhea_, region A [Jmol] [rasmolscript] [script source]
        - Domain d2hheb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d2hhec_, region C [Jmol] [rasmolscript] [script source]
        - Domain d2hhed_, region D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hhe_A] [2hhe_B] [2hhe] [2hhe_C] [2hhe_D]
  • SWISS-PROT database: [P69905] [P68871]
  • Belongs to the pore-forming globin (globin) family according to TCDB.
  • Belongs to the pore-forming globin (globin) family according to TCDB.
  • Domain organization of [HBA_HUMAN] [HBB_HUMAN] by SWISSPFAM
  • Other resources with information on 2HHE
  • Community annotation for 2HHE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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