2HHH date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand KSG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


C


D


E


F


G


H


I


J


K


L


M


N


O


P


Q


R


S


T


U


Primary referenceThe antibiotic kasugamycin mimics mRNA nucleotides to destabilize tRNA binding and inhibit canonical translation initiation., Schluenzen F, Takemoto C, Wilson DN, Kaminishi T, Harms JM, Hanawa-Suetsugu K, Szaflarski W, Kawazoe M, Shirouzo M, Nierhaus KH, Yokoyama S, Fucini P, Nat Struct Mol Biol. 2006 Oct;13(10):871-8. Epub 2006 Sep 24. PMID:16998488
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1015 Kb) [Save to disk]
  • Biological Unit Coordinates (2hhh.pdb1.gz) 1007 Kb
  • LPC: Ligand-Protein Contacts for 2HHH
  • CSU: Contacts of Structural Units for 2HHH
  • Likely Quarternary Molecular Structure file(s) for 2HHH
  • Structure Factors (2120 Kb)
  • Retrieve 2HHH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HHH from S2C, [Save to disk]
  • Re-refined 2hhh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2HHH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hhh] [2hhh_A] [2hhh_B] [2hhh_C] [2hhh_D] [2hhh_E] [2hhh_F] [2hhh_G] [2hhh_H] [2hhh_I] [2hhh_J] [2hhh_K] [2hhh_L] [2hhh_M] [2hhh_N] [2hhh_O] [2hhh_P] [2hhh_Q] [2hhh_R] [2hhh_S] [2hhh_T] [2hhh_U]
  • SWISS-PROT database: [Q5SHN7] [P80376] [Q5SHN3] [P80377] [Q5SHQ1] [Q5SJ76] [Q5SJH3] [Q5SHP7] [Q5SLQ0] [Q5SHP2] [P80380] [P80371] [P80372] [P80373] [Q5SHQ5] [Q5SLP8] [P17291] [Q5SHQ2] [P80374] [Q5SIH3]
  • Domains found in 2HHH: [KH] [Ribosomal_S10] [Ribosomal_S15] [Ribosomal_S4] [S4 ] by SMART

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