2HIW Transferase date Jun 29, 2006
title Crystal Structure Of Inactive Conformation Abl Kinase Cataly Complexed With Type II Inhibitor
authors C.Lee
compound source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Abl1
Chain: A, B
Fragment: Kinase Catalytic Domain
Synonym: P150, C-Abl, Abelson Murine Leukemia Viral Oncogen 1;
Ec: 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Abl1, Abl, Jtk7
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf21
symmetry Space Group: P 41
R_factor 0.243 R_Free 0.309
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.485 41.485 332.602 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand 7MP enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA general strategy for creating "inactive-conformation" abl inhibitors., Okram B, Nagle A, Adrian FJ, Lee C, Ren P, Wang X, Sim T, Xie Y, Wang X, Xia G, Spraggon G, Warmuth M, Liu Y, Gray NS, Chem Biol. 2006 Jul;13(7):779-86. PMID:16873026
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (2hiw.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (2hiw.pdb2.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 2HIW
  • CSU: Contacts of Structural Units for 2HIW
  • Likely Quarternary Molecular Structure file(s) for 2HIW
  • Retrieve 2HIW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HIW from S2C, [Save to disk]
  • View 2HIW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HIW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HIW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hiw_B] [2hiw_A] [2hiw]
  • SWISS-PROT database: [P00519]
  • Domain organization of [ABL1_HUMAN] by SWISSPFAM
  • Domain found in 2HIW: [TyrKc ] by SMART
  • Other resources with information on 2HIW
  • Community annotation for 2HIW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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