2HMD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 2EG enzyme
Primary referenceStereochemistry Modulates the Stability of Reduced Interstrand Cross-Links Arising from R- and S-alpha-CH(3)-gamma-OH-1,N(2)-Propano-2'-deoxyguanosine in the 5'-CpG-3' DNA Sequence., Cho YJ, Kozekov ID, Harris TM, Rizzo CJ, Stone MP, Biochemistry. 2007 Mar 13;46(10):2608-21. Epub 2007 Feb 17. PMID:17305317
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk]
  • Biological Unit Coordinates (2hmd.pdb1.gz) 13 Kb
  • LPC: Ligand-Protein Contacts for 2HMD
  • CSU: Contacts of Structural Units for 2HMD
  • Original NMR restraints for 2HMD from PDB
  • Retrieve 2HMD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HMD from S2C, [Save to disk]
  • View 2HMD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hmd] [2hmd_A] [2hmd_B]
  • SWISS-PROT database:

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