2HQL Crystal structure of a small single-stranded DNA binding protein from Mycoplasma pneumoniae date
authors Das, D., BSGC, Berkeley.Structural.Genomics.Center.
compound source
symmetry
R_factor
R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
note 2HQL is a representative structure
Primary referenceCrystal structure of a novel single-stranded DNA binding protein from Mycoplasma pneumoniae., Das D, Hyun H, Lou Y, Yokota H, Kim R, Kim SH, Proteins. 2007 May 15;67(3):776-82. PMID:17348019
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (2hql.pdb1.gz) 36 Kb
  • Biological Unit Coordinates (2hql.pdb2.gz) 35 Kb
  • Biological Unit Coordinates (2hql.pdb3.gz) 35 Kb
  • CSU: Contacts of Structural Units for 2HQL
  • Likely Quarternary Molecular Structure file(s) for 2HQL
  • Structure Factors (400 Kb)
  • Retrieve 2HQL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HQL from S2C, [Save to disk]
  • Re-refined 2hql structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HQL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HQL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HQL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hql_B] [2hql_F] [2hql_C] [2hql_D] [2hql] [2hql_E] [2hql_A]
  • SWISS-PROT database: [P75224]
  • Domain organization of [Y554_MYCPN] by SWISSPFAM
  • Other resources with information on 2HQL
  • Community annotation for 2HQL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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