2HQV X-ray Crystal Structure of Protein AGR_C_4470 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium Target AtR92. date
authors Vorobiev, S.M., Neely, H., Seetharaman, J., Zhao, L., Cunningham, K., Ma, L.C., Fang, Y., Xiao, R., Acton, T., Montelione, T.G., Hunt, J.F., Tong, L., NESG, Northeast.Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand MSE enzyme
Gene AGR (C. caroliniana)
Primary referenceCrystal structure of AGR_C_4470p from Agrobacterium tumefaciens., Vorobiev SM, Neely H, Seetharaman J, Ma LC, Xiao R, Acton TB, Montelione GT, Tong L, Protein Sci. 2007 Mar;16(3):535-8. PMID:17322535
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (2hqv.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 2HQV
  • CSU: Contacts of Structural Units for 2HQV
  • Likely Quarternary Molecular Structure file(s) for 2HQV
  • Structure Factors (385 Kb)
  • Retrieve 2HQV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HQV from S2C, [Save to disk]
  • Re-refined 2hqv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HQV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HQV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HQV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hqv] [2hqv_A]
  • SWISS-PROT database: [Q7CX01]
  • Domain organization of [Q7CX01_AGRT5] by SWISSPFAM
  • Other resources with information on 2HQV
  • Community annotation for 2HQV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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