2HTY Hydrolase date Jul 26, 2006
title N1 Neuraminidase
authors R.J.Russell, L.F.Haire, D.J.Stevens, P.J.Collins, Y.P.Lin, G.M.Bl A.J.Hay, S.J.Gamblin, J.J.Skehel
compound source
Molecule: Neuraminidase
Chain: A, B, C, D, E, F, G, H
Synonym: Neuraminidase Na
Mutation: Yes
 Organism_scientific: Influenza A Virus
Organism_taxid: 11320
symmetry Space Group: C 2 2 21
R_factor 0.232 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
200.210 200.770 211.680 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand CA, NAG, NDG enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceThe structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design., Russell RJ, Haire LF, Stevens DJ, Collins PJ, Lin YP, Blackburn GM, Hay AJ, Gamblin SJ, Skehel JJ, Nature. 2006 Sep 7;443(7107):45-9. Epub 2006 Aug 16. PMID:16915235
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (499 Kb) [Save to disk]
  • Biological Unit Coordinates (2hty.pdb1.gz) 246 Kb
  • Biological Unit Coordinates (2hty.pdb2.gz) 242 Kb
  • LPC: Ligand-Protein Contacts for 2HTY
  • CSU: Contacts of Structural Units for 2HTY
  • Likely Quarternary Molecular Structure file(s) for 2HTY
  • Structure Factors (2846 Kb)
  • Retrieve 2HTY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HTY from S2C, [Save to disk]
  • Re-refined 2hty structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2HTY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2HTY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HTY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hty_H] [2hty_G] [2hty_D] [2hty_C] [2hty_E] [2hty_F] [2hty_A] [2hty] [2hty_B]
  • SWISS-PROT database: [Q6DPL2]
  • Domain organization of [Q6DPL2_9INFA] by SWISSPFAM
    • Other resources with information on 2HTY
  • Community annotation for 2HTY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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