2HU7 Hydrolase date Jul 26, 2006
title Binding Of Inhibitors By Acylaminoacyl Peptidase
authors A.L.Kiss, B.Hornung, K.Radi, Z.Gengeliczki, B.Sztaray, V.Harmat, L
compound source
Molecule: Acylamino-Acid-Releasing Enzyme
Chain: A, B
Synonym: Aare, Acyl-Peptide Hydrolase, Aph, Acylaminoacyl-P
Ec: 3.4.19.1
Engineered: Yes
Organism_scientific: Aeropyrum Pernix
Organism_taxid: 56636
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
symmetry Space Group: P 21 21 21
R_factor 0.176 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.682 103.989 168.594 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.01 Å
ligand ACE, GOL, PHE enzyme Hydrolase E.C.3.4.19.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe Acylaminoacyl Peptidase from Aeropyrum pernix K1 Thought to Be an Exopeptidase Displays Endopeptidase Activity., Kiss AL, Hornung B, Radi K, Gengeliczki Z, Sztaray B, Juhasz T, Szeltner Z, Harmat V, Polgar L, J Mol Biol. 2007 Apr 27;368(2):509-20. Epub 2007 Feb 20. PMID:17350041
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (182 Kb) [Save to disk]
  • Biological Unit Coordinates (2hu7.pdb1.gz) 176 Kb
  • LPC: Ligand-Protein Contacts for 2HU7
  • CSU: Contacts of Structural Units for 2HU7
  • Likely Quarternary Molecular Structure file(s) for 2HU7
  • Structure Factors (1106 Kb)
  • Retrieve 2HU7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HU7 from S2C, [Save to disk]
  • Re-refined 2hu7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HU7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HU7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HU7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hu7] [2hu7_B] [2hu7_A]
  • SWISS-PROT database: [Q9YBQ2]
  • Domain organization of [APEH_AERPE] by SWISSPFAM
  • Other resources with information on 2HU7
  • Community annotation for 2HU7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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