2HXM	Hydrolase	date	Aug 03, 2006
title	Complex Of Ung2 And A Small Molecule Synthetic Inhibitor
authors	M.A.Bianchet, D.J.Krosky, S.Ghung, L.Seiple, L.M.Amzel, J.T.Stive
compound		source
Molecule: Uracil-Dna Glycosylase Chain: A Synonym: Udg, Ung2 Ec: 3.2.2.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ung, Dgu, Ung15 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.182 R_Free 0.206
crystal cell	length a length b length c angle alpha angle beta angle gamma 43.209 69.030 70.318 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.30 Å
ligand	302	enzyme	Hydrolase E.C.3.2.2 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Mimicking damaged DNA with a small molecule inhibitor of human UNG2., Krosky DJ, Bianchet MA, Seiple L, Chung S, Amzel LM, Stivers JT, Nucleic Acids Res. 2006;34(20):5872-9. Epub 2006 Oct 24. PMID:17062624

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk] Biological Unit Coordinates (2hxm.pdb1.gz) 42 Kb LPC: Ligand-Protein Contacts for 2HXM CSU: Contacts of Structural Units for 2HXM Likely Quarternary Molecular Structure file(s) for 2HXM Structure Factors (371 Kb) Retrieve 2HXM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2HXM from S2C, [Save to disk] Re-refined 2hxm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2HXM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2HXM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2HXM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2hxm_A] [2hxm] SWISS-PROT database: [P13051] Domain organization of [UNG_HUMAN] by SWISSPFAM Domains found in 2HXM: [UDG] [UreE_C ] by SMART

Other resources with information on 2HXM

Community annotation for 2HXM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---