2I38 Rna Binding Protein Chimera date Aug 17, 2006
title Solution Structure Of The Rrm Of Srp20
authors Y.F.Hargous, F.H.T.Allain
compound source
Molecule: Fusion Protein Consists Of Immunoglobulin G-Bindi G And Splicing Factor, Arginineserine-Rich 3;
Chain: A
Fragment: Rrm Domain
Synonym: Pre-Mrna-Splicing Factor Srp20
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Spg And Sfrs3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Codon+ Ril
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet-28
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMolecular basis of RNA recognition and TAP binding by the SR proteins SRp20 and 9G8., Hargous Y, Hautbergue GM, Tintaru AM, Skrisovska L, Golovanov AP, Stevenin J, Lian LY, Wilson SA, Allain FH, EMBO J. 2006 Nov 1;25(21):5126-37. Epub 2006 Oct 12. PMID:17036044
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (733 Kb) [Save to disk]
  • Biological Unit Coordinates (2i38.pdb1.gz) 39 Kb
  • CSU: Contacts of Structural Units for 2I38
  • Original NMR restraints for 2I38 from PDB
  • Retrieve 2I38 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I38 from S2C, [Save to disk]
    • View 2I38 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2I38
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2I38, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i38_A] [2i38]
  • SWISS-PROT database: [P84103] [P19909]
  • Domain organization of [SFRS3_HUMAN] [SPG2_STRSG] by SWISSPFAM
  • Domain found in 2I38: [RRM ] by SMART
    • Other resources with information on 2I38
  • Community annotation for 2I38 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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