2I3T Cell Cycle date Aug 20, 2006
title Bub3 Complex With Mad3 (Bubr1) Glebs Motif
authors N.A.Larsen, S.C.Harrison
compound source
Molecule: Cell Cycle Arrest Protein
Chain: A, C, E, G
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Gene: Bub3, Yor026w, Or26.16
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-Duet (Novagen)

Molecule: Spindle Assembly Checkpoint Component
Chain: B, D, F, H
Synonym: Mitotic Mad3 Protein
Engineered: Yes

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Gene: Mad3, Yjl013c, J1341
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-Duet (Novagen)
symmetry Space Group: P 1 21 1
R_factor 0.238 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.352 173.335 90.019 90.00 95.30 90.00
method X-Ray Diffractionresolution 2.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A, C, G, E


Primary referenceStructural analysis of Bub3 interactions in the mitotic spindle checkpoint., Larsen NA, Al-Bassam J, Wei RR, Harrison SC, Proc Natl Acad Sci U S A. 2007 Jan 23;104(4):1201-6. Epub 2007 Jan 16. PMID:17227844
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (239 Kb) [Save to disk]
  • Biological Unit Coordinates (2i3t.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (2i3t.pdb2.gz) 63 Kb
  • Biological Unit Coordinates (2i3t.pdb3.gz) 61 Kb
  • Biological Unit Coordinates (2i3t.pdb4.gz) 62 Kb
  • CSU: Contacts of Structural Units for 2I3T
  • Likely Quarternary Molecular Structure file(s) for 2I3T
  • Structure Factors (296 Kb)
  • Retrieve 2I3T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I3T from S2C, [Save to disk]
  • Re-refined 2i3t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2I3T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2I3T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2I3T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i3t_E] [2i3t_F] [2i3t_C] [2i3t_H] [2i3t_D] [2i3t] [2i3t_G] [2i3t_A] [2i3t_B]
  • SWISS-PROT database: [P26449] [P47074]
  • Domain organization of [BUB3_YEAST] [MAD3_YEAST] by SWISSPFAM
  • Domain found in 2I3T: [WD40 ] by SMART
  • Other resources with information on 2I3T
  • Community annotation for 2I3T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science