2IA0 Structural Genomics, Unknown Function date Sep 06, 2006
title Transcriptional Regulatory Protein Pf0864 From Pyrococcus Fu Member Of The Asnc Family (Pf0864)
authors H.Yang, J.Chang, Z.J.Liu, J.P.Rose, B.C.Wang, Southeast Collabora Structural Genomics, Southeast Collaboratory For Structural (Secsg)
compound source
Molecule: Putative Hth-Type Transcriptional Regulator Pf086
Chain: A, B
Engineered: Yes
Organism_scientific: Pyrococcus Furiosus
Organism_taxid: 2261
Gene: Pf0864
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: P 21 21 21
R_factor 0.205 R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.074 70.372 96.536 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.37 Å
ligand AU enzyme
note 2IA0 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (2ia0.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 2IA0
  • CSU: Contacts of Structural Units for 2IA0
  • Likely Quarternary Molecular Structure file(s) for 2IA0
  • Structure Factors (243 Kb)
  • Retrieve 2IA0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IA0 from S2C, [Save to disk]
  • Re-refined 2ia0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IA0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IA0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IA0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ia0] [2ia0_B] [2ia0_A]
  • SWISS-PROT database: [Q8U2H1]
  • Domain organization of [REG4_PYRFU] by SWISSPFAM
  • Domain found in 2IA0: [HTH_ASNC ] by SMART
  • Other resources with information on 2IA0
  • Community annotation for 2IA0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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