2IBK | Transferase Dna | date | Sep 11, 2006 |
||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
title | Bypass Of Major Benzopyrene-Dg Adduct By Y-Family Dna Polyme Unique Structural Gap | ||||||||||||||
authors | J.Bauer, H.Ling, J.M.Sayer, G.Xing, H.Yagi, D.M.Jerina | ||||||||||||||
compound | source | ||||||||||||||
Molecule: 5'-D(Gpgpgpgpgpapapgpgpaptptpapt)-3 Chain: D Engineered: Yes |
Synthetic: Yes | ||||||||||||||
Molecule: 5'-D(Tpcpaptpgpapaptpcpcptptpcpcpc 3'; Chain: E Engineered: Yes |
Synthetic: Yes | ||||||||||||||
Molecule: Dna Polymerase Iv Chain: A Synonym: Pol Iv Ec: 2.7.7.7 Engineered: Yes |
Organism_scientific: Sulfolobus Solfataricus Organism_taxid: 273057 Strain: P2 Gene: Dbh, Dpo4 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet22b | ||||||||||||||
symmetry | Space Group: P 21 21 2 |
| |||||||||||||
crystal cell |
| ||||||||||||||
method | X-Ray Diffraction | resolution | 2.25 Å | ||||||||||||
ligand | BAP, CA, EDO, GOL, POP | enzyme | Transferase E.C.2.7.7.7 BRENDA | ||||||||||||
Gene Ontology |
| ||||||||||||||
Primary reference | A structural gap in Dpo4 supports mutagenic bypass of a major benzo[a]pyrene dG adduct in DNA through template misalignment., Bauer J, Xing G, Yagi H, Sayer JM, Jerina DM, Ling H, Proc Natl Acad Sci U S A. 2007 Sep 18;104(38):14905-10. Epub 2007 Sep 11. PMID:17848527 |
Data retrieval |
View 2IBK in 3D |
Visual 3D analysis of 2IBK |
Structure-derived information |
Sequence-derived information |
Other resources with information on 2IBK |
Movements, Movies and Images |
OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |